003 P1PK Blood Group
The gene A4GALT encodes 4-α-galactosyltransferase, the enzyme that synthesizes P1 and Pk antigens. P1 antigen is synthesized on paragloboside and Pk antigen on lactosylceramide. Changes in exon 2a distinguish P1 and P2 phenotypes. Differences from reference allele A4GALT*P1.01 (accession number GU902278) are given below. A nucleotide change of C>T (ACG>ATG) in exon 2a of A4GALT introduces an open reading frame in transcripts that include exons 1 and 2a. This is associated with fewer enzyme-encoding transcripts (comprising exon 3) in the presence of the P2 allele but it is unknown how this transcriptional regulation occurs.
Reference Info
Gene: A4GALT
Allele: A4GALT*P1.01
Seq: NG_007495.1 (genomic), NM_017436.4 (transcript)
Entrez GeneID: 53947
Number of exons: 4
Allele: A4GALT*P1.01
Seq: NG_007495.1 (genomic), NM_017436.4 (transcript)
Entrez GeneID: 53947
Number of exons: 4
Loading Data ... |
allele_category | Phenotype | Allele Name | Nucleotide Changes |
Exon | Amino Acid Changes |
hg38 | gnomAD | rsNum | GenBank | Reference |
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4:Null Alleles | p | A4GALT*01N.01.01 |
c.241_243delTTC c.903C>G |
Exon 3
Exon 3 |
p.Phe81del |
chr22:42693711 chr22:42693049 |
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4:Null Alleles | p | A4GALT*01N.01.02 | c.241_243delTTC | Exon 3 | p.Phe81del | chr22:42693711 | ||||
4:Null Alleles | p | A4GALT*01N.02 | c.287G>A | Exon 3 | p.Cys96Tyr | chr22:42693665 | ||||
4:Null Alleles | p | A4GALT*01N.03.01 |
c.299C>T c.903C>G |
Exon 3
Exon 3 |
p.Ser100Leu |
chr22:42693653 chr22:42693049 |
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4:Null Alleles | p | A4GALT*01N.03.02 | c.299C>T | Exon 3 | p.Ser100Leu | chr22:42693653 | ||||
4:Null Alleles | p | A4GALT*01N.04 | c.301delG | Exon 3 | p.Ala101Profs*13 | chr22:42693651 | ||||
4:Null Alleles | p | A4GALT*01N.05 | c.418_428delinsTGGACCTGCTGGACCTGCTGGACCTGCTGGAACA | Exon 3 | p.Gln140Trpfs*73 | chr22:42693534 |
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4:Null Alleles | p | A4GALT*01N.06 | c.470_496delinsCGTACCCGAC | Exon 3 | p.Asp157Alafs*120 | chr22:42693482 |
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4:Null Alleles | p | A4GALT*01N.07 | c.473G>A | Exon 3 | p.Trp158* | chr22:42693479 |
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4:Null Alleles | p | A4GALT*01N.08 |
c.504dupC c.914C>T |
Exon 3
Exon 3 |
p.Tyr169Leufs*114 |
chr22:42693448 chr22:42693038 |
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4:Null Alleles | p | A4GALT*01N.09.01 | c.548T>A | Exon 3 | p.Met183Lys | chr22:42693404 | ||||
4:Null Alleles | p | A4GALT*01N.09.02 |
c.548T>A c.987G>A |
Exon 3
Exon 3 |
p.Met183Lys |
chr22:42693404 chr22:42692965 |
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4:Null Alleles | p | A4GALT*01N.10 | c.559G>C | Exon 3 | p.Gly187Arg | chr22:42693393 |
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4:Null Alleles | p | A4GALT*01N.11 | c.560G>A | Exon 3 | p.Gly187Asp | chr22:42693392 | ||||
4:Null Alleles | p | A4GALT*01N.12 | c.656C>T | Exon 3 | p.Ala219Val | chr22:42693296 | ||||
4:Null Alleles | p | A4GALT*01N.13 | c.657delG | Exon 3 | p.Phe220Serfs*130 | chr22:42693295 |
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4:Null Alleles | p | A4GALT*01N.14 | c.732dupG | Exon 3 | p.Ile245Aspfs*38 | chr22:42693220 |
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4:Null Alleles | p | A4GALT*01N.15 | c.751C>T | Exon 3 | p.Pro251Ser | chr22:42693201 |
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4:Null Alleles | p | A4GALT*01N.16 | c.752C>T | Exon 3 | p.Pro251Leu | chr22:42693200 | ||||
4:Null Alleles | p | A4GALT*01N.17 | c.769delG | Exon 3 | p.Val257Serfs*93 | chr22:42693183 | ||||
4:Null Alleles | p | A4GALT*01N.18 | c.783G>A | Exon 3 | p.Trp261* | chr22:42693169 |
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4:Null Alleles | p | A4GALT*01N.19 | c.972_997del | Exon 3 | p.Arg325Alafs*113 | chr22:42692980 | ||||
4:Null Alleles | p | A4GALT*01N.20 | c.1029dupC | Exon 3 | p.Thr344Hisfs*103 | chr22:42692923 | ||||
4:Null Alleles | p | A4GALT*01N.21 | c.201dupC | Exon 3 | p.Thr68Hisfs*215 | chr22:42693751 |
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4:Null Alleles | p | A4GALT*01N.22 | c.418C>T | Exon 3 | p.Gln140* | chr22:42693534 | ||||
4:Null Alleles | p | A4GALT*01N.23 | c.498G>A | Exon 3 | p.Trp166* | chr22:42693454 | ||||
0:Antigen Alleles | P1+/-, Pk+ | A4GALT*01† | ||||||||
4:Null Alleles | p | A4GALT*02N.01 | c.68dupT | Exon 3 | p.Phe24Valfs*31 | chr22:42693884 |
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4:Null Alleles | p | A4GALT*02N.02 | c.290C>T | Exon 3 | p.Ser97Leu | chr22:42693662 | ||||
4:Null Alleles | p | A4GALT*02N.03 | c.752C>T | Exon 3 | p.Pro251Leu | chr22:42693200 | ||||
4:Null Alleles | p | A4GALT*02N.04 | c.902delC | Exon 3 | p.Glu302Argfs*48 | chr22:42693050 |
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4:Null Alleles | p | A4GALT*02N.05 | c.972_997del | Exon 3 | p.Arg325Alafs*113 | chr22:42692980 | ||||
4:Null Alleles | p | A4GALT*02N.06 | c.388dupA | Exon 3 | p.Ile130Asnfs*153 | chr22:42693564 |
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4:Null Alleles | p | A4GALT*02N.07 |
c.367T>C c.547_548delAT |
Exon 3
Exon 3 |
p.Ser123Pro p.Met183Valfs*99 |
chr22:42693585 chr22:42693405 |
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4:Null Alleles | p | A4GALT*02N.08 | c.480_495dupGGCCGTGCAGGGGCGC | Exon 3 | p.Trp166Glyfs*122 | chr22:42693472 |
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0:Antigen Alleles | P1+/-, Pk+ | A4GALT*02† | c.109A>G | Exon 3 | p.Met37Val | chr22:42693843 | ||||
0:Antigen Alleles | NOR+, P1+, Pk+ | A4GALT*04‡ | c.631C>G | Exon 3 | p.Gln211Glu | chr22:42693321 |
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4:Null Alleles | p | A4GALT*N.01 | NC_000022.10:g.4309 7156_43129968del (Exon 1 deleted) | p.0 | ||||||
4:Null Alleles | p | A4GALT*N.02 | NC_000022.10:g.4310 3896_43124759del (Exon 1 deleted) | p.0 | ||||||
4:Null Alleles | p | A4GALT*N.03 | NC_000022.10:g.4309 5125_43120758del (Exon 1 deleted) | p.0 | ||||||
0:Antigen Alleles | P1+ Pk+ (P1) | A4GALT*P1.01 | ||||||||
0:Antigen Alleles | P1- Pk+ (P2) | A4GALT*P2.01 | c.2C>T | Potential start codon introduced | chr22:42720755 |
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0:Antigen Alleles | P1- Pk+ (P2) | A4GALT*P2.02 |
c.2C>T c.82T>G |
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p.Gly28Trp Potential start codon introduced |
chr22:42720755 chr22:42720675 |
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